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Nextcloud AIO is not the only way to run Nextcloud in docker. For example you can use the Nextcloud docker repository and docker-compose for which there are many examples. I've been running Nextcloud this way for many years now without any un-recoverable issues, and no issues at all that weren't caused by me. Upgrading is also very easy since you simply increment the version in docker-compose.yml and restart the service.
That said the NixOS suggestion from @StrawberryPigtails@lemmy.sdf.org looks really neat and I may try that out soon my self since I've never played with NixOS before and it seems like a good excuse to do so.
Keeping this in the back pocket in case the NixOS ideas don't work out, thanks for sharing!